Browsing by Author "Dai, Rui"
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Item Open Access Accelerated Brain Atrophy, Microstructural Decline and Connectopathy in Age-Related Macular Degeneration.(Biomedicines, 2024-01-10) Stout, Jacques A; Mahzarnia, Ali; Dai, Rui; Anderson, Robert J; Cousins, Scott; Zhuang, Jie; Lad, Eleonora M; Whitaker, Diane B; Madden, David J; Potter, Guy G; Whitson, Heather E; Badea, AlexandraAge-related macular degeneration (AMD) has recently been linked to cognitive impairment. We hypothesized that AMD modifies the brain aging trajectory, and we conducted a longitudinal diffusion MRI study on 40 participants (20 with AMD and 20 controls) to reveal the location, extent, and dynamics of AMD-related brain changes. Voxel-based analyses at the first visit identified reduced volume in AMD participants in the cuneate gyrus, associated with vision, and the temporal and bilateral cingulate gyrus, linked to higher cognition and memory. The second visit occurred 2 years after the first and revealed that AMD participants had reduced cingulate and superior frontal gyrus volumes, as well as lower fractional anisotropy (FA) for the bilateral occipital lobe, including the visual and the superior frontal cortex. We detected faster rates of volume and FA reduction in AMD participants in the left temporal cortex. We identified inter-lingual and lingual-cerebellar connections as important differentiators in AMD participants. Bundle analyses revealed that the lingual gyrus had a lower streamline length in the AMD participants at the first visit, indicating a connection between retinal and brain health. FA differences in select inter-lingual and lingual cerebellar bundles at the second visit showed downstream effects of vision loss. Our analyses revealed widespread changes in AMD participants, beyond brain networks directly involved in vision processing.Item Open Access Maintenance and neuronal differentiation of chicken induced pluripotent stem-like cells.(Stem Cells Int, 2014) Dai, Rui; Rossello, Ricardo; Chen, Chun-Chun; Kessler, Joeran; Davison, Ian; Hochgeschwender, Ute; Jarvis, Erich DPluripotent stem cells have the potential to become any cell in the adult body, including neurons and glia. Avian stem cells could be used to study questions, like vocal learning, that would be difficult to examine with traditional mouse models. Induced pluripotent stem cells (iPSCs) are differentiated cells that have been reprogrammed to a pluripotent stem cell state, usually using inducing genes or other molecules. We recently succeeded in generating avian iPSC-like cells using mammalian genes, overcoming a limitation in the generation and use of iPSCs in nonmammalian species (Rosselló et al., 2013). However, there were no established optimal cell culture conditions for avian iPSCs to establish long-term cell lines and thus to study neuronal differentiation in vitro. Here we present an efficient method of maintaining chicken iPSC-like cells and for differentiating them into action potential generating neurons.Item Open Access Mammalian genes induce partially reprogrammed pluripotent stem cells in non-mammalian vertebrate and invertebrate species.(Elife, 2013-09-03) Rosselló, Ricardo Antonio; Chen, Chun-Chun; Dai, Rui; Howard, Jason T; Hochgeschwender, Ute; Jarvis, Erich DCells are fundamental units of life, but little is known about evolution of cell states. Induced pluripotent stem cells (iPSCs) are once differentiated cells that have been re-programmed to an embryonic stem cell-like state, providing a powerful platform for biology and medicine. However, they have been limited to a few mammalian species. Here we found that a set of four mammalian transcription factor genes used to generate iPSCs in mouse and humans can induce a partially reprogrammed pluripotent stem cell (PRPSCs) state in vertebrate and invertebrate model organisms, in mammals, birds, fish, and fly, which span 550 million years from a common ancestor. These findings are one of the first to show cross-lineage stem cell-like induction, and to generate pluripotent-like cells for several of these species with in vivo chimeras. We suggest that the stem-cell state may be highly conserved across a wide phylogenetic range. DOI:http://dx.doi.org/10.7554/eLife.00036.001.Item Open Access The Role of Gammadelta T Cells and CD8+ Memory T Cells in Vaccinia Viral Infection(2021) Dai, RuiImmune responses against viral infections are mediated through a complex process by diverse populations of cells, that can be harnessed for tumor immunotherapies and vaccinations. Vaccinia virus (VV) is the most studied member of the poxvirus family and is responsible for the successful elimination of smallpox worldwide. It is unique among well-studied viruses in that it replicates solely in the host cytoplasm and is able to elicit one of the longest lasting immunity in recorded human history. Its success in vaccination has led to the development of adjuvants with VV epitopes and recombinant VV vectors for other infectious diseases and cancer immunotherapy. However, the mechanism behind how VV elicits such a strong immune response from the immune system remains insufficiently understood.
Previous studies have shown that although activation of NK cells is critical for the initial control of VV infection, efficient activation of CD8+ T cell response is required for the eradication of VV infection. It has also been demonstrated that gammadelta T cells play an important part in the immune response against VV infection. However, both processes remain relatively undefined. What promotes CD8+ T cell activation and subsequent generation of CD8+ memory T cells in response to VV infection is still not very well dissected, and the mechanisms that govern gammadelta T cells response to VV are relatively unknown. This thesis examines these questions through three main aims: 1) influence of gammadelta T cells on CD8+ T cell activation, 2) gammadelta T cell direct cytotoxicity against VV infection, and 3) mechanisms that govern CD8+ memory T cell formation. The overall goal of this thesis is to understand the mechanisms behind gammadelta T and CD8+ T cells responses against VV infection.
We found that gammadelta T cells play an important role in promoting CD8+ T cell response to VV infection. We showed that gammadelta T cells serve not only as antigen presenting cells to CD8+ T cell activation, but also as mediators of other signals of CD8+ T cell response in vivo. We further demonstrated that cell-intrinsic MyD88 signaling in gammadelta T cells is required for activation of CD8+ T cells. Contrary to conventional expectations, we found that NKG2D expression in both NK and CD8+ T cells only have partial effect on the elimination of VV post-infection. Instead, we found that NKG2D is an important activator of gammadelta T cell cytotoxicity for VV clearance. Lastly, we demonstrated that Notch1, but not Notch2, deficiency increases the formation of CD8+ memory T cells, through modulating the expression of TCF1/Tcf7. We discovered that cleaved Notch1 intracellular domain binds upstream of Tcf7 and controls the expression of Tcf7 for CD8+ memory T cell formation.
These results demonstrated a critical role for gammadelta T cells in viral clearance and the regulation of adaptive T cell response, with insights into the formation of CD8+ memory T cells. Collectively, this dissertation seeks to better understand how gammadelta T and CD8+ T cells respond to VV infection, with the hopes of shedding additional light on the design of more effective vaccine strategies based on the precise manipulation of immune cell populations for infectious diseases and cancer immunotherapy.