Browsing by Author "Elston, Timothy C"

Now showing 1 - 4 of 4
  • Thumbnail Image
    ItemOpen Access
    Exploratory polarization facilitates mating partner selection in Saccharomyces cerevisiae.
    (Molecular biology of the cell, 2021-05) Clark-Cotton, Manuella R; Henderson, Nicholas T; Pablo, Michael; Ghose, Debraj; Elston, Timothy C; Lew, Daniel J
    Yeast decode pheromone gradients to locate mating partners, providing a model for chemotropism. How yeast polarize toward a single partner in crowded environments is unclear. Initially, cells often polarize in unproductive directions, but then they relocate the polarity site until two partners' polarity sites align, whereupon the cells "commit" to each other by stabilizing polarity to promote fusion. Here we address the role of the early mobile polarity sites. We found that commitment by either partner failed if just one partner was defective in generating, orienting, or stabilizing its mobile polarity sites. Mobile polarity sites were enriched for pheromone receptors and G proteins, and we suggest that such sites engage in an exploratory search of the local pheromone landscape, stabilizing only when they detect elevated pheromone levels. Mobile polarity sites were also enriched for pheromone secretion factors, and simulations suggest that only focal secretion at polarity sites would produce high pheromone concentrations at the partner's polarity site, triggering commitment.
  • Thumbnail Image
    ItemOpen Access
    Principles that govern competition or co-existence in Rho-GTPase driven polarization.
    (PLoS computational biology, 2018-04-12) Chiou, Jian-Geng; Ramirez, Samuel A; Elston, Timothy C; Witelski, Thomas P; Schaeffer, David G; Lew, Daniel J
    Rho-GTPases are master regulators of polarity establishment and cell morphology. Positive feedback enables concentration of Rho-GTPases into clusters at the cell cortex, from where they regulate the cytoskeleton. Different cell types reproducibly generate either one (e.g. the front of a migrating cell) or several clusters (e.g. the multiple dendrites of a neuron), but the mechanistic basis for unipolar or multipolar outcomes is unclear. The design principles of Rho-GTPase circuits are captured by two-component reaction-diffusion models based on conserved aspects of Rho-GTPase biochemistry. Some such models display rapid winner-takes-all competition between clusters, yielding a unipolar outcome. Other models allow prolonged co-existence of clusters. We investigate the behavior of a simple class of models and show that while the timescale of competition varies enormously depending on model parameters, a single factor explains a large majority of this variation. The dominant factor concerns the degree to which the maximal active GTPase concentration in a cluster approaches a "saturation point" determined by model parameters. We suggest that both saturation and the effect of saturation on competition reflect fundamental properties of the Rho-GTPase polarity machinery, regardless of the specific feedback mechanism, which predict whether the system will generate unipolar or multipolar outcomes.
  • Thumbnail Image
    ItemOpen Access
    Ratiometric GPCR signaling enables directional sensing in yeast.
    (PLoS biology, 2019-10-17) Henderson, Nicholas T; Pablo, Michael; Ghose, Debraj; Clark-Cotton, Manuella R; Zyla, Trevin R; Nolen, James; Elston, Timothy C; Lew, Daniel J
    Accurate detection of extracellular chemical gradients is essential for many cellular behaviors. Gradient sensing is challenging for small cells, which can experience little difference in ligand concentrations on the up-gradient and down-gradient sides of the cell. Nevertheless, the tiny cells of the yeast Saccharomyces cerevisiae reliably decode gradients of extracellular pheromones to find their mates. By imaging the behavior of polarity factors and pheromone receptors, we quantified the accuracy of initial polarization during mating encounters. We found that cells bias the orientation of initial polarity up-gradient, even though they have unevenly distributed receptors. Uneven receptor density means that the gradient of ligand-bound receptors does not accurately reflect the external pheromone gradient. Nevertheless, yeast cells appear to avoid being misled by responding to the fraction of occupied receptors rather than simply the concentration of ligand-bound receptors. Such ratiometric sensing also serves to amplify the gradient of active G protein. However, this process is quite error-prone, and initial errors are corrected during a subsequent indecisive phase in which polarity clusters exhibit erratic mobile behavior.
  • Thumbnail Image
    ItemOpen Access
    Systematic analysis of F-box proteins reveals a new branch of the yeast mating pathway
    (Journal of Biological Chemistry) Rangarajan, Nambirajan; Gordy, Claire L; Askew, Lauren; Bevill, Samantha M; Elston, Timothy C; Errede, Beverly; Hurst, Jillian H; Kelley, Joshua B; Sheetz, Joshua B; Suzuki, Sara Kimiko; Valentin, Natalie H; Young, Everett; Dohlman, Henrik G