Browsing by Subject "morphology"
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Item Open Access Anatomical identification of extracellularly recorded cells in large-scale multielectrode recordings.(J Neurosci, 2015-03-18) Li, Peter H; Gauthier, Jeffrey L; Schiff, Max; Sher, Alexander; Ahn, Daniel; Field, Greg D; Greschner, Martin; Callaway, Edward M; Litke, Alan M; Chichilnisky, EJThis study combines for the first time two major approaches to understanding the function and structure of neural circuits: large-scale multielectrode recordings, and confocal imaging of labeled neurons. To achieve this end, we develop a novel approach to the central problem of anatomically identifying recorded cells, based on the electrical image: the spatiotemporal pattern of voltage deflections induced by spikes on a large-scale, high-density multielectrode array. Recordings were performed from identified ganglion cell types in the macaque retina. Anatomical images of cells in the same preparation were obtained using virally transfected fluorescent labeling or by immunolabeling after fixation. The electrical image was then used to locate recorded cell somas, axon initial segments, and axon trajectories, and these signatures were used to identify recorded cells. Comparison of anatomical and physiological measurements permitted visualization and physiological characterization of numerically dominant ganglion cell types with high efficiency in a single preparation.Item Open Access Comparative morphology of reproductive structures in heterosporous water ferns and a reevaluation of the sporocarp(International Journal of Plant Sciences, 2006-07-01) Nagalingum, NS; Schneider, H; Pryer, KMHeterosporous water ferns (Marsileaceae and Salviniaceae) are the only extant group of plants to have evolved heterospory since the Paleozoic. These ferns possess unusual reproductive structures traditionally termed "sporocarps." Using an evolutionary framework, we critically examine the complex homology issues pertaining to these structures. Comparative morphological study reveals that all heterosporous ferns bear indusiate sori on a branched, nonlaminate structure that we refer to as the sorophore; this expanded definition highlights homology previously obscured by the use of different terms. By using a homology-based concept, we aim to discontinue the use of historically and functionally based morphological terminology. We recognize the sorophore envelope as a structure that surrounds the sorophore and sori. The sorophore envelope is present in Marsileaceae as a sclerenchymatous sporocarp wall and in Azolla as a parenchymatous layer, but it is absent in Salvinia. Both homology assessments and phylogenetic character-state reconstructions using the Cretaceous fossil Hydropteris are consistent with a single origin of the sorophore envelope in heterosporous ferns. Consequently, we restrict the term "sporocarp" to a sorophore envelope and all it contains. Traditional usage of "sporocarp" is misleading because it implies homology for nonhomologous structures, and structures historically called sporocarps in Salviniaceae are more appropriately referred to as sori. © 2006 by The University of Chicago. All rights reserved.Item Open Access Phylogeny of Marsileaceous Ferns and Relationships of the Fossil Hydropteris pinnata Reconsidered.(International journal of plant sciences, 1999-09) Pryer, KMRecent phylogenetic studies have provided compelling evidence that confirms the once disputed hypothesis of monophyly for heterosporous leptosporangiate ferns (Marsileaceae and Salviniaceae). Hypotheses for relationships among the three genera of Marsileaceae (Marsilea, Regnellidium, and Pilularia), however, have continued to be in conflict. The phylogeny of Marsileaceae is investigated here using information from morphology and rbcL sequence data. In addition, relationships among all heterosporous ferns, including the whole-plant fossil Hydropteris pinnata are reconsidered. Data sets of 71 morphological and 1239 rbcL characters for 23 leptosporangiate ferns, including eight heterosporous ingroup taxa and 15 homosporous outgroup taxa, were subjected to maximum parsimony analysis. Morphological analyses were carried out both with and without the fossil Hydropteris, and it was excluded from all analyses with rbcL data. An annotated list of the 71 morphological characters is provided in the appendix. For comparative purposes, the Rothwell and Stockey (1994) data set was also reanalyzed here. The best estimate of phylogenetic relationships for Marsileaceae in all analyses is that Pilularia and Regnellidium are sister taxa and Marsilea is sister to that clade. Morphological synapomorphies for various nodes are discussed. Analyses that included Hydropteris resulted in two most-parsimonious trees that differ only in the placement of the fossil. One topology is identical to the relationship found by Rothwell and Stockey (1994), placing the fossil sister to the Azolla plus Salvinia clade. The alternative topology places Hydropteris as the most basal member of the heterosporous fern clade. Equivocal interpretations for character evolution in heterosporous ferns are discussed in the context of these two most-parsimonious trees. Because of the observed degree of character ambiguity, the phylogenetic placement of Hydropteris is best viewed as unresolved, and recognition of the suborder Hydropteridineae, as circumscribed by Rothwell and Stockey (1994), is regarded as premature. The two competing hypotheses of relationships for heterosporous ferns are also compared with the known temporal distribution of relevant taxa. Stratigraphic fit of the phylogenetic estimates is measured by using the Stratigraphic Consistency Index and by comparison with minimum divergence times.Item Open Access The Functional Significance of Early Homo Pelvis Morphology(2024) Cook, Rebecca WThe transition from the Pliocene to the Pleistocene appears to be a time of major transition in the hominin lineage with likely adaptive shifts in behavior. Homo erectus is a temporally broad species with apparent behavioral plasticity and potentially related morphological variability. Some H. erectus postcranial material exhibits traits that indicate a general trend of mechanical reinforcement at loadbearing sites across the pelvis and femur. One such fossil, KNM-ER 3228, is a presumed H. erectus os coxae that is representative of this morphological pattern of robusticity, which includes pronounced acetabulosacral and acetabulocristal buttresses and rugose musculoligamentous attachment sites. This femoropelvic complex represents an evolutionarily stable morphological pattern across a significant portion of the Pleistocene, but its biomechanical significance is not well understood. Moderate increases in encephalization combined with an increase in body size seen in H. erectus may be implicated in early Homo pelvic evolution, as the mechanical consequences of a larger body and expansion of the birth canal for parturition may have led to increased loads during locomotion. The retention of ancestral traits in the H. erectus pelvis (such as laterally flared ilia), coupled with derived traits (such as the expanded birth canal), may have necessitated greater robusticity in the pelvis to reduce strain magnitudes in the bone. Alternatively, this robusticity may be serving to reduce strains within the context of behavioral adaptations, such as endurance running or long-distance walking, that may have increased the magnitude or frequency of loads relative to australopiths. This dissertation addresses two objectives relative to the biomechanical significance of the femoropelvic complex of H. erectus. Objective 1 is to investigate the degree to which the patterns we see in some H. erectus pelves are due to body size scaling of bony features resulting from an evolutionary increase in body size. Objective 2 is to determine what, if any, functional significance may be assigned to the femoropelvic complex, beyond that which body size scaling to keep strain magnitudes within physiological limits may explain. A gait analysis study is conducted in which kinematic and kinetic data from modern humans are collected and used as input for a series of finite element models. These models are created from a sample of modern humans, an Australopithecus africanus pelvis (Sts 14), and a novel reconstruction of KNM-ER 3228 (early Homo) created using 3D geometric morphometrics. The results of these finite element models lead to the rejection of the hypothesis that higher magnitude loads in the H. erectus pelvis resulting from increased body size and modest encephalization resulted in the increased robusticity of pelvic features. This mechanical robusticity was hypothesized to maintain strain levels within manageable physiological levels in the context of the retention of ancestral states. Instead, the lower strains incurred during normal bipedal walking in the H. erectus pelvis suggest a pelvis adapted to bipedal walking, beyond that which strain maintenance can explain. Further, the results of finite element analyses of KNM-ER 3228 and modern humans while running provide evidence to support a hypothesis that mechanical buttressing of the H. erectus pelvis is an adaptation to an increased number of loading cycles (relative to australopiths) in the context of long-distance walking and/or endurance running, and/or high magnitude loads in the context of endurance running. This dissertation contributes to the investigation of unanswered questions in Homo pelvic evolution and highlights the value of comparative modeling in paleoanthropology.