Browsing by Subject "physics.optics"

Now showing 1 - 5 of 5
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    Diffraction tomography with a deep image prior
    Zhou, Kevin C; Horstmeyer, Roarke
    We present a tomographic imaging technique, termed Deep Prior Diffraction Tomography (DP-DT), to reconstruct the 3D refractive index (RI) of thick biological samples at high resolution from a sequence of low-resolution images collected under angularly varying illumination. DP-DT processes the multi-angle data using a phase retrieval algorithm that is extended by a deep image prior (DIP), which reparameterizes the 3D sample reconstruction with an untrained, deep generative 3D convolutional neural network (CNN). We show that DP-DT effectively addresses the missing cone problem, which otherwise degrades the resolution and quality of standard 3D reconstruction algorithms. As DP-DT does not require pre-captured data or pre-training, it is not biased towards any particular dataset. Hence, it is a general technique that can be applied to a wide variety of 3D samples, including scenarios in which large datasets for supervised training would be infeasible or expensive. We applied DP-DT to obtain 3D RI maps of bead phantoms and complex biological specimens, both in simulation and experiment, and show that DP-DT produces higher-quality results than standard regularization techniques. We further demonstrate the generality of DP-DT, using two different scattering models, the first Born and multi-slice models. Our results point to the potential benefits of DP-DT for other 3D imaging modalities, including X-ray computed tomography, magnetic resonance imaging, and electron microscopy.
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    Imaging dynamics beneath turbid media via parallelized single-photon detection
    (CoRR, 2021-07-03) Xu, Shiqi; Yang, Xi; Liu, Wenhui; Jonsson, Joakim; Qian, Ruobing; Konda, Pavan Chandra; Zhou, Kevin C; Kreiss, Lucas; Dai, Qionghai; Wang, Haoqian; Berrocal, Edouard; Horstmeyer, Roarke
    Noninvasive optical imaging through dynamic scattering media has numerous important biomedical applications but still remains a challenging task. While standard diffuse imaging methods measure optical absorption or fluorescent emission, it is also well-established that the temporal correlation of scattered coherent light diffuses through tissue much like optical intensity. Few works to date, however, have aimed to experimentally measure and process such temporal correlation data to demonstrate deep-tissue video reconstruction of decorrelation dynamics. In this work, we utilize a single-photon avalanche diode (SPAD) array camera to simultaneously monitor the temporal dynamics of speckle fluctuations at the single-photon level from 12 different phantom tissue surface locations delivered via a customized fiber bundle array. We then apply a deep neural network to convert the acquired single-photon measurements into video of scattering dynamics beneath rapidly decorrelating tissue phantoms. We demonstrate the ability to reconstruct images of transient (0.1-0.4s) dynamic events occurring up to 8 mm beneath a decorrelating tissue phantom with millimeter-scale resolution, and highlight how our model can flexibly extend to monitor flow speed within buried phantom vessels.
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    One-dimensional waveguide coupled to multiple qubits: Photon-photon correlations
    (EPJ Quantum Technology, 2014-12-01) Fang, YLL; Zheng, H; Baranger, HU
    For a one-dimensional (1D) waveguide coupled to two or three qubits, we show that the photon-photon correlations have a wide variety of behavior, with structure that depends sensitively on the frequency and on the qubit-qubit separation L. We study the correlations by calculating the second-order correlation function g 2 (t) in which the interference among the photons multiply scattered from the qubits causes rich structure. In one case, for example, transmitted and reflected photons are both bunched initially, but then become strongly anti-bunched for a long time interval. We first calculate the correlation function g2(t) including non-Markovian effects and then show that a much simpler Markovian treatment, which can be solved analytically, is accurate for small qubit separation. As a result, the non-classical properties of microwaves in a 1D waveguide coupled to many superconducting qubits with experimentally accessible separation L could be readily explored with our approach.
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    Quantitative Jones matrix imaging using vectorial Fourier ptychography
    (2021-09-30) Dai, Xiang; Xu, Shiqi; Yang, Xi; Zhou, Kevin C; Glass, Carolyn; Konda, Pavan Chandra; Horstmeyer, Roarke
    This paper presents a microscopic imaging technique that uses variable-angle illumination to recover the complex polarimetric properties of a specimen at high resolution and over a large field-of-view. The approach extends Fourier ptychography, which is a synthetic aperture-based imaging approach to improve resolution with phaseless measurements, to additionally account for the vectorial nature of light. After images are acquired using a standard microscope outfitted with an LED illumination array and two polarizers, our vectorial Fourier Ptychography (vFP) algorithm solves for the complex 2x2 Jones matrix of the anisotropic specimen of interest at each resolved spatial location. We introduce a new sequential Gauss-Newton-based solver that additionally jointly estimates and removes polarization-dependent imaging system aberrations. We demonstrate effective vFP performance by generating large-area (29 mm$^2$), high-resolution (1.24 $\mu$m full-pitch) reconstructions of sample absorption, phase, orientation, diattenuation, and retardance for a variety of calibration samples and biological specimens.
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    Ultra-broadband microwave metamaterial absorber
    (Applied Physics Letters, 2012-03-05) Ding, Fei; Cui, Yanxia; Ge, Xiaochen; Jin, Yi; He, Sailing
    A microwave ultra-broadband polarization-independent metamaterial absorber is demonstrated. It is composed of a periodic array of metal-dielectric multilayered quadrangular frustum pyramids. These pyramids possess resonant absorption modes at multi-frequencies, of which the overlapping leads to the total absorption of the incident wave over an ultra-wide spectral band. The experimental absorption at normal incidence is above 90% in the frequency range of 7.8-14.7GHz, and the absorption is kept large when the incident angle is smaller than 60 degrees. The experimental results agree well with the numerical simulation.