Browsing by Author "Li, Y"

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  • Li, Y; Yang, H; Ying, L (2015-01-01)
    © 2015 Society for Industrial and Applied Mathematics.This paper presents an efficient multiscale butterfly algorithm for computing Fourier integral operators (FIOs) of the form (Lf)(x) =∫ <inf>ℝ d</inf>a(x, ξ)e<sup>2πiΦ ...
  • Bradnam, KR; Fass, JN; Alexandrov, A; Baranay, P; Bechner, M; Birol, I; Boisvert, S; Chapman, JA; Chapuis, G; Chikhi, R; Chitsaz, H; Chou, W-C; Corbeil, J; Del Fabbro, C; Docking, TR; Durbin, R; Earl, D; Emrich, S; Fedotov, P; Fonseca, NA; Ganapathy, G; Gibbs, RA; Gnerre, S; Godzaridis, E; Goldstein, S; Haimel, M; Hall, G; Haussler, D; Hiatt, JB; Ho, IY; Howard, J; Hunt, M; Jackman, SD; Jaffe, DB; Jarvis, ED; Jiang, H; Kazakov, S; Kersey, PJ; Kitzman, JO; Knight, JR; Koren, S; Lam, T-W; Lavenier, D; Laviolette, F; Li, Y; Li, Z; Liu, B; Liu, Y; Luo, R; Maccallum, I; Macmanes, MD; Maillet, N; Melnikov, S; Naquin, D; Ning, Z; Otto, TD; Paten, B; Paulo, OS; Phillippy, AM; Pina-Martins, F; Place, M; Przybylski, D; Qin, X; Qu, C; Ribeiro, FJ; Richards, S; Rokhsar, DS; Ruby, JG; Scalabrin, S; Schatz, MC; Schwartz, DC; Sergushichev, A; Sharpe, T; Shaw, TI; Shendure, J; Shi, Y; Simpson, JT; Song, H; Tsarev, F; Vezzi, F; Vicedomini, R; Vieira, BM; Wang, J; Worley, KC; Yin, S; Yiu, S-M; Yuan, J; Zhang, G; Zhang, H; Zhou, S; Korf, IF (2013-07-22)
    BACKGROUND: The process of generating raw genome sequence data continues to become cheaper, faster, and more accurate. However, assembly of such data into high-quality, finished genome sequences remains challenging. Many ...
  • Huang, J; Allada, K; Dutta, C; Katich, J; Qian, X; Wang, Y; Zhang, Y; Aniol, K; Annand, JR; Averett, T; Benmokhtar, F; Bertozzi, W; Bradshaw, PC; Bosted, P; Camsonne, A; Canan, M; Cates, GD; Chen, C; Chen, JP; Chen, W; Chirapatpimol, K; Chudakov, E; Cisbani, E; Cornejo, JC; Cusanno, F; Dalton, MM; Deconinck, W; de Jager, CW; De Leo, R; Deng, X; Deur, A; Ding, H; Dolph, PA; Dutta, D; El Fassi, L; Frullani, S; Gao, H; Garibaldi, F; Gaskell, D; Gilad, S; Gilman, R; Glamazdin, O; Golge, S; Guo, L; Hamilton, D; Hansen, O; Higinbotham, DW; Holmstrom, T; Huang, M; Ibrahim, HF; Iodice, M; Jiang, X; Jin, G; Jones, MK; Kelleher, A; Kim, W; Kolarkar, A; Korsch, W; Lerose, JJ; Li, X; Li, Y; Lindgren, R; Liyanage, N; Long, E; Lu, HJ; Margaziotis, DJ; Markowitz, P; Marrone, S; McNulty, D; Meziani, ZE; Michaels, R; Moffit, B; Muñoz Camacho, C; Nanda, S; Narayan, A; Nelyubin, V; Norum, B; Oh, Y; Osipenko, M; Parno, D; Peng, JC; Phillips, SK; Posik, M; Puckett, AJ; Qiang, Y; Rakhman, A; Ransome, RD; Riordan, S; Saha, A; Sawatzky, B; Schulte, E; Shahinyan, A; Shabestari, MH; Sirca, S; Stepanyan, S; Subedi, R; Sulkosky, V; Tang, LG; Tobias, A; Urciuoli, GM; Vilardi, I; Wang, K; Wojtsekhowski, B; Yan, X; Yao, H; Ye, Y; Ye, Z; Yuan, L; Zhan, X; Zhang, YW; Zhao, B; Zheng, X; Zhu, L; Zhu, X; Zong, X; Jefferson Lab Hall A Collaboration (2012-02-03)
    We report the first measurement of the double-spin asymmetry A{LT} for charged pion electroproduction in semi-inclusive deep-inelastic electron scattering on a transversely polarized {3}He target. The kinematics focused ...
  • Li, Y; Lu, J (2017-11-30)
    This work aims at understanding of bold diagrammatic Monte Carlo (BDMC) methods for stochastic summation of Feynman diagrams from the angle of stochastic iterative methods. The convergence enhancement trick of the BDMC is ...
  • Li, Y; Yang, H; Martin, ER; Ho, KL; Ying, L (2015-01-01)
    © 2015 Society for Industrial and Applied Mathematics.The paper introduces the butterfly factorization as a data-sparse approximation for the matrices that satisfy a complementary low-rank property. The factorization can ...
  • He, K; Li, Y; Zhu, J; Liu, H; Lee, JE; Amos, CI; Hyslop, T; Jin, J; Lin, H; Wei, Q; Li, Y (2016-01-01)
    MOTIVATION: Technological advances that allow routine identification of high-dimensional risk factors have led to high demand for statistical techniques that enable full utilization of these rich sources of information for ...
  • Li, Y; Pan, K; Chen, L; Ning, J-L; Li, X; Yang, T; Terrando, Niccolò; Gu, J; Tao, G (2016-10-12)
    BACKGROUND: Postoperative cognitive dysfunction (POCD) is a common complication after surgery, especially amongst elderly patients. Neuroinflammation and iron homeostasis are key hallmarks of several neurological disorders. ...
  • O'Neal, WT; Wang, YG; Wu, Hau-Tieng; Zhang, Z-M; Li, Y; Tereshchenko, LG; Estes, EH; Daubechies, Ingrid; Soliman, EZ (2016-09-15)
    The association between the J wave, a key component of the early repolarization pattern, and adverse cardiovascular outcomes remains unclear. Inconsistencies have stemmed from the different methods used to measure the J ...
  • Wang, SD; Rath, P; Lal, B; Richard, J-P; Li, Y; Goodwin, CR; Laterra, J; Xia, S (2012-12-13)
    Glioblastoma multiforme (GBM) is the most frequent and aggressive primary brain tumors in adults. Uncontrolled proliferation and abnormal cell migration are two prominent spatially and temporally disassociated characteristics ...
  • Qian, X; Horn, T; Clasie, B; Arrington, J; Asaturyan, R; Benmokhtar, F; Boeglin, W; Bosted, P; Bruell, A; Christy, ME; Chudakov, E; Dalton, MM; Daniel, A; Day, D; Dutta, D; El Fassi, L; Ent, R; Fenker, HC; Ferrer, J; Fomin, N; Gao, H; Garrow, K; Gaskell, D; Gray, C; Huber, GM; Jones, MK; Kalantarians, N; Keppel, CE; Kramer, K; Li, Y; Liang, Y; Lung, AF; Malace, S; Markowitz, P; Matsumura, A; Meekins, DG; Mertens, T; Miyoshi, T; Mkrtchyan, H; Monson, R; Navasardyan, T; Niculescu, G; Niculescu, I; Okayasu, Y; Opper, AK; Perdrisat, C; Punjabi, V; Rauf, AW; Rodriquez, VM; Rohe, D; Seely, J; Segbefia, E; Smith, GR; Sumihama, M; Tadevosyan, V; Tang, L; Villano, A; Vulcan, WF; Wesselmann, FR; Wood, SA; Yuan, L; Zheng, X (2010-05-25)
    Cross sections for the H1(e,e′π+)n process on H1, H2, C12, Al27, Cu63, and Au197 targets were measured at the Thomas Jefferson National Accelerator Facility (Jefferson Lab) to extract nuclear transparencies. Data were taken ...
  • Zeng, Y; Chen, H; Ni, T; Ruan, R; Feng, L; Nie, C; Cheng, L; Li, Y; Tao, W; Gu, J; Land, KC; Yashin, A; Tan, Q; Yang, Z; Bolund, L; Yang, H; Hauser, Elizabeth Rebecca; Willcox, DC; Willcox, BJ; Tian, X-L; Vaupel, James Walton (2015-04)
    Logistic regression analysis based on data from 822 Han Chinese oldest old aged 92+ demonstrated that interactions between carrying FOXO1A-266 or FOXO3-310 or FOXO3-292 and tea drinking at around age 60 or at present time ...
  • Li, Y; Fan, X; Goodwin, CR; Laterra, J; Xia, S (2008-11-07)
    BACKGROUND: Hepatocyte growth factor (HGF) and its receptor c-MET are commonly expressed in malignant gliomas and embryonic neuroectodermal tumors including medulloblastoma and appear to play an important role in the growth ...
  • Ganapathy, G; Howard, JT; Ward, JM; Li, J; Li, B; Li, Y; Xiong, Y; Zhang, Y; Zhou, S; Schwartz, DC; Schatz, M; Aboukhalil, R; Fedrigo, O; Bukovnik, L; Wang, T; Wray, G; Rasolonjatovo, I; Winer, R; Knight, JR; Koren, S; Warren, WC; Zhang, G; Phillippy, AM; Jarvis, ED (2014)
    BACKGROUND: Parrots belong to a group of behaviorally advanced vertebrates and have an advanced ability of vocal learning relative to other vocal-learning birds. They can imitate human speech, synchronize their body movements ...
  • Yang, G; Holl, TM; Liu, Y; Li, Y; Lu, X; Nicely, NI; Kepler, TB; Alam, SM; Liao, HX; Cain, DW; Spicer, L; VandeBerg, JL; Haynes, BF; Kelsoe, G (2013-02-11)
    Many human monoclonal antibodies that neutralize multiple clades of HIV-1 are polyreactive and bind avidly to mammalian autoantigens. Indeed, the generation of neutralizing antibodies to the 2F5 and 4E10 epitopes of HIV-1 ...
  • Zhang, H; Ehiri, J; Yang, H; Tang, S; Li, Y (2016)
    BACKGROUND: Poor adherence to tuberculosis (TB) treatment can lead to prolonged infectivity and poor treatment outcomes. Directly observed treatment (DOT) seeks to improve adherence to TB treatment by observing patients ...
  • Rudicell, RS; Holland Jones, J; Wroblewski, EE; Learn, GH; Li, Y; Robertson, JD; Greengrass, E; Grossmann, F; Kamenya, S; Pintea, L; Mjungu, DC; Lonsdorf, EV; Mosser, A; Lehman, C; Collins, DA; Keele, BF; Goodall, J; Hahn, BH; Pusey, AE; Wilson, ML (2010-09-23)
    Like human immunodeficiency virus type 1 (HIV-1), simian immunodeficiency virus of chimpanzees (SIVcpz) can cause CD4+ T cell loss and premature death. Here, we used molecular surveillance tools and mathematical modeling ...
  • Thaden, JT; Li, Y; Ruffin, Felicia; Maskarinec, SA; Hill-Rorie, JM; Wanda, LC; Reed, SD; Fowler, Vance Garrison Jr. (2016-12-19)
    The clinical and economic impact of bloodstream infections (BSI) due to multidrug resistant (MDR) Gram negative bacteria is incompletely understood. From 2009-2015, all adult inpatients with Gram negative BSI at our ...
  • Jiang, D; Liang, J; Campanella, GS; Guo, R; Yu, S; Xie, T; Liu, N; Jung, Y; Homer, R; Meltzer, EB; Li, Y; Tager, AM; Goetinck, PF; Luster, AD; Noble, PW (2010-06)
    Pulmonary fibrosis is a progressive, dysregulated response to injury culminating in compromised lung function due to excess extracellular matrix production. The heparan sulfate proteoglycan syndecan-4 is important in ...
  • Zeng, Y; Chen, H; Ni, T; Ruan, R; Nie, C; Liu, X; Feng, L; Zhang, F; Lu, J; Li, J; Li, Y; Tao, W; Gregory, SG; Gottschalk, William Kirby; Lutz, MW; Land, KC; Yashin, A; Tan, Q; Yang, Z; Bolund, L; Ming, Q; Yang, H; Min, J; Willcox, DC; Willcox, BJ; Gu, J; Hauser, Elizabeth Rebecca; Tian, X-L; Vaupel, James Walton (2016-06)
    On the basis of the genotypic/phenotypic data from Chinese Longitudinal Healthy Longevity Survey (CLHLS) and Cox proportional hazard model, the present study demonstrates that interactions between carrying FOXO1A-209 ...