Browsing by Author "Spana, Eric P"
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A paired-end sequencing strategy to map the complex landscape of transcription initiation.
Ni, Ting; Corcoran, David L; Rach, Elizabeth A; Song, Shen; Spana, Eric P; Gao, Yuan; Ohler, Uwe; ... (8 authors) (Nature methods, 2010-07)Recent studies using high-throughput sequencing protocols have uncovered the complexity of mammalian transcription by RNA polymerase II, helping to define several initiation patterns in which transcription start sites (TSSs) ... -
Characterization of the tilt (tt) phenotype in Drosophila melanogaster.
Houtman, Arno; Gruber, Samuel; Reisert, Hailey; Amini, Mina; Fiore, Caroline; Gonzalez, Paula; Han, Veronica; ... (17 authors) (microPublication biology, 2023-01)In the early 20th century, Calvin Bridges and Thomas Morgan identified a number of spontaneous mutations that displayed visible phenotypes in adult flies and subsequent analysis of these mutations over the past century have ... -
Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution.
Leung, Wilson; Shaffer, Christopher D; Reed, Laura K; Smith, Sheryl T; Barshop, William; Dirkes, William; Dothager, Matthew; ... (1014 authors) (G3 (Bethesda, Md.), 2015-03-04)The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution ... -
speck, First Identified in Drosophila melanogaster in 1910, Is Encoded by the Arylalkalamine N-Acetyltransferase (AANAT1) Gene.
Spana, Eric P; Abrams, Amanda B; Ellis, Katharine T; Klein, Jason C; Ruderman, Brandon T; Shi, Alvin H; Zhu, Daniel; ... (9 authors) (G3 (Bethesda, Md.), 2020-09-02)The pigmentation mutation speck is a commonly used recombination marker characterized by a darkly pigmented region at the wing hinge. Identified in 1910 by Thomas Hunt Morgan, speck was characterized by Sturtevant as the ... -
Retrotransposons Are the Major Contributors to the Expansion of the Drosophila ananassae Muller F Element.
Leung, Wilson; Shaffer, Christopher D; Chen, Elizabeth J; Quisenberry, Thomas J; Ko, Kevin; Braverman, John M; Giarla, Thomas C; ... (276 authors) (G3 (Bethesda, Md.), 2017-08-07)The discordance between genome size and the complexity of eukaryotes can partly be attributed to differences in repeat density. The Muller F element (∼5.2 Mb) is the smallest chromosome in Drosophila melanogaster, but it ...