Phytochrome diversity in green plants and the origin of canonical plant phytochromes.
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Phytochromes are red/far-red photoreceptors that play essential roles in diverse plant morphogenetic and physiological responses to light. Despite their functional significance, phytochrome diversity and evolution across photosynthetic eukaryotes remain poorly understood. Using newly available transcriptomic and genomic data we show that canonical plant phytochromes originated in a common ancestor of streptophytes (charophyte algae and land plants). Phytochromes in charophyte algae are structurally diverse, including canonical and non-canonical forms, whereas in land plants, phytochrome structure is highly conserved. Liverworts, hornworts and Selaginella apparently possess a single phytochrome, whereas independent gene duplications occurred within mosses, lycopods, ferns and seed plants, leading to diverse phytochrome families in these clades. Surprisingly, the phytochrome portions of algal and land plant neochromes, a chimera of phytochrome and phototropin, appear to share a common origin. Our results reveal novel phytochrome clades and establish the basis for understanding phytochrome functional evolution in land plants and their algal relatives.
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Published Version (Please cite this version)10.1038/ncomms8852
Publication InfoLi, Fay-Wei; Melkonian, Michael; Rothfels, Carl J; Villarreal, Juan Carlos; Stevenson, Dennis W; Graham, Sean W; ... Mathews, Sarah (2015). Phytochrome diversity in green plants and the origin of canonical plant phytochromes. Nat Commun, 6. pp. 7852. 10.1038/ncomms8852. Retrieved from https://hdl.handle.net/10161/10330.
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Professor of Biology
My research focuses on understanding the evolutionary relationships of ancient land plants, especially ferns and horsetails, by integrating evidence from morphology, molecules (DNA sequence data from multiple genes), and the fossil record. I use an explicit phylogenetic framework to examine the morphological evolution of various sporophytic and gametophytic characters within vascular plants, and to gain insight into the evolution of various life history traits and the body plans that typ