From spiking neuron models to linear-nonlinear models.
Abstract
Neurons transform time-varying inputs into action potentials emitted stochastically
at a time dependent rate. The mapping from current input to output firing rate is
often represented with the help of phenomenological models such as the linear-nonlinear
(LN) cascade, in which the output firing rate is estimated by applying to the input
successively a linear temporal filter and a static non-linear transformation. These
simplified models leave out the biophysical details of action potential generation.
It is not a priori clear to which extent the input-output mapping of biophysically
more realistic, spiking neuron models can be reduced to a simple linear-nonlinear
cascade. Here we investigate this question for the leaky integrate-and-fire (LIF),
exponential integrate-and-fire (EIF) and conductance-based Wang-Buzsáki models in
presence of background synaptic activity. We exploit available analytic results for
these models to determine the corresponding linear filter and static non-linearity
in a parameter-free form. We show that the obtained functions are identical to the
linear filter and static non-linearity determined using standard reverse correlation
analysis. We then quantitatively compare the output of the corresponding linear-nonlinear
cascade with numerical simulations of spiking neurons, systematically varying the
parameters of input signal and background noise. We find that the LN cascade provides
accurate estimates of the firing rates of spiking neurons in most of parameter space.
For the EIF and Wang-Buzsáki models, we show that the LN cascade can be reduced to
a firing rate model, the timescale of which we determine analytically. Finally we
introduce an adaptive timescale rate model in which the timescale of the linear filter
depends on the instantaneous firing rate. This model leads to highly accurate estimates
of instantaneous firing rates.
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Journal articlePermalink
https://hdl.handle.net/10161/15128Published Version (Please cite this version)
10.1371/journal.pcbi.1001056Publication Info
Ostojic, Srdjan; & Brunel, Nicolas (2011). From spiking neuron models to linear-nonlinear models. PLoS Comput Biol, 7(1). pp. e1001056. 10.1371/journal.pcbi.1001056. Retrieved from https://hdl.handle.net/10161/15128.This is constructed from limited available data and may be imprecise. To cite this
article, please review & use the official citation provided by the journal.
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Show full item recordScholars@Duke
Nicolas Brunel
Duke School of Medicine Distinguished Professor in Neuroscience
We use theoretical models of brain systems to investigate how they process and learn
information from their inputs. Our current work focuses on the mechanisms of learning
and memory, from the synapse to the network level, in collaboration with various experimental
groups. Using methods fromstatistical physics, we have shown recently that the synapticconnectivity
of a network that maximizes storage capacity reproducestwo key experimentally observed
features: low connection proba

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