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Development of a Voxel-Based RadiomicsCalculation Platform for Medical Image Analysis

dc.contributor.advisor Yin, Fang-Fang Yang, Zhenyu 2020-06-09T17:45:29Z 2021-06-01T08:17:18Z 2020
dc.description Master's thesis
dc.description.abstract <p>Purpose: To develop a novel voxel-based radiomics extraction technique, and to investigate the potential association between spatially-encoded radiomics features of the lungs and pulmonary function.</p><p>Methods: We developed a voxel-based radiomics feature extraction platform to generate radiomics filtered images. Specifically, for each voxel in the image, 62 radiomics features were calculated in a rotationally-invariant 3D neighbourhood to capture spatially-encoded information. In general, such an approach results in an image tensor object, i.e., each voxel in the original image is represented by a 62-dimensional radiomics feature vector. Two digital phantoms are then designed to validate the technique's ability to quantify regional image information. To test the technique as a potential pulmonary biomarker, we generated radiomics filtered images for 25 lung CT image and are subsequently evaluated against corresponding Galligas PET images, as the ground truth for pulmonary function, using voxel-wise Spearman correlation (r). The Canonical Correlation Analysis (CCA)-based feature fusion method is also implemented to enhance such a correlation. Finally, the Spearman distributions were compared with 37 individual CT ventilation image (CTVI) algorithms to assess the overall performance relative to conventional CT-based techniques.</p><p>Results: Several radiomics filtered images were identified to be correlated with Galligas PET lung imaging. The most robust association was found to be the Run Length Encoding feature, Run-Length Non-uniformity (0.21<r<0.65, median=0.45). this association can be substantially improved (from 0.21<r<0.65 to 0.32<r<0.73) following CCA-based feature fusion. Furthermore, The association comparison with 37 individual CTVI algorithms reveals that our voxel-based CT radiomics analysis outperforms most CTVI algorithms in characterizing the regional lung functions. </p><p>Conclusions: This preliminary study indicates that spatially-encoded lung texture and lung density are potentially associated with pulmonary function as measured via Galligas PET ventilation images. Collectively, low density, heterogeneous coarse lung texture was often associated with lower Galligas radiotracer amounts.</p>
dc.subject Medical imaging
dc.subject feature extraction
dc.subject pulmonary function
dc.subject radiomics
dc.title Development of a Voxel-Based RadiomicsCalculation Platform for Medical Image Analysis
dc.type Master's thesis
dc.department Medical Physics DKU
duke.embargo.months 11.736986301369862

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