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Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth.

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Date
2020-11-19
Authors
Roark, Ryan S
Li, Hui
Williams, Wilton B
Chug, Hema
Mason, Rosemarie D
Gorman, Jason
Wang, Shuyi
Lee, Fang-Hua
Rando, Juliette
Bonsignori, Mattia
Hwang, Kwan-Ki
Saunders, Kevin O
Wiehe, Kevin
Moody, M Anthony
Hraber, Peter T
Wagh, Kshitij
Giorgi, Elena E
Russell, Ronnie M
Bibollet-Ruche, Frederic
Liu, Weimin
Connell, Jesse
Smith, Andrew G
DeVoto, Julia
Murphy, Alexander I
Smith, Jessica
Ding, Wenge
Zhao, Chengyan
Chohan, Neha
Okumura, Maho
Rosario, Christina
Ding, Yu
Lindemuth, Emily
Bauer, Anya M
Bar, Katharine J
Ambrozak, David
Chao, Cara W
Chuang, Gwo-Yu
Geng, Hui
Lin, Bob C
Louder, Mark K
Nguyen, Richard
Zhang, Baoshan
Lewis, Mark G
Raymond, Donald D
Doria-Rose, Nicole A
Schramm, Chaim A
Douek, Daniel C
Roederer, Mario
Kepler, Thomas B
Kelsoe, Garnett
Mascola, John R
Kwong, Peter D
Korber, Bette T
Harrison, Stephen C
Haynes, Barton F
Hahn, Beatrice H
Shaw, George M
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Abstract
Neutralizing antibodies elicited by HIV-1 coevolve with viral envelope proteins (Env) in distinctive patterns, in some cases acquiring substantial breadth. We report that primary HIV-1 envelope proteins-when expressed by simian-human immunodeficiency viruses in rhesus macaques-elicited patterns of Env-antibody coevolution strikingly similar to those in humans. This included conserved immunogenetic, structural and chemical solutions to epitope recognition and precise Env-am ino acid substitutions, insertions and deletions leading to virus persistence. The structure of one rhesus antibody, capable of neutralizing 49% of a 208-strain panel, revealed a V2-apex mode of recognition like that of human bNAbs PGT145/PCT64-35S. Another rhesus antibody bound the CD4-binding site by CD4 mimicry mirroring human bNAbs 8ANC131/CH235/VRC01. Virus-antibody coevolution in macaques can thus recapitulate developmental features of human bNAbs, thereby guiding HIV-1 immunogen design.
Type
Journal article
Permalink
https://hdl.handle.net/10161/21823
Published Version (Please cite this version)
10.1126/science.abd2638
Publication Info
Roark, Ryan S; Li, Hui; Williams, Wilton B; Chug, Hema; Mason, Rosemarie D; Gorman, Jason; ... Shaw, George M (2020). Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth. Science (New York, N.Y.). pp. eabd2638-eabd2638. 10.1126/science.abd2638. Retrieved from https://hdl.handle.net/10161/21823.
This is constructed from limited available data and may be imprecise. To cite this article, please review & use the official citation provided by the journal.
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Scholars@Duke

Bonsignori

Mattia Bonsignori

Associate Professor in Medicine
HIV vaccine development Study of B-cell immune responses in HIV positive individuals Determination of correlates of protective immunity to HIV Induction of broadly neutralizing antibodies to HIV Development of multiplex functional assays for the evaluation at a single-cell level of B-cell responses to vaccinations, infections and in vitro stimulation Epidemiology and characterization of bacterial resistance determinants (past) </do
This author no longer has a Scholars@Duke profile, so the information shown here reflects their Duke status at the time this item was deposited.
Kelsoe

Garnett H. Kelsoe

James B. Duke Distinguished Professor of Immunology
1. Lymphocyte development and antigen-driven diversification of immunoglobulin and T cell antigen receptor genes. 2. The germinal center reaction and mechanisms for clonal selection and self - tolerance. The origins of autoimmunity. 3. Interaction of innate- and adaptive immunity and the role of inflammation in lymphoid organogenesis. 4. The role of secondary V(D)J gene rearrangment in lymphocyte development and malignancies. 5. Mathematical modeling of immune responses,
Moody

Michael Anthony Moody

Professor of Pediatrics
Tony Moody, MD is a Professor in the Department of Pediatrics, Division of Infectious Diseases and Professor in the Department of Integrative Immunobiology at Duke University Medical Center. Research in the Moody lab is focused on understanding the B cell responses during infection, vaccination, and disease. The lab has become a resource for human phenotyping, flow characterization, staining and analysis at the Duke Human Vaccine Institute (DHVI). The Moody lab is currently funded to study in
Saunders

Kevin O'Neil Saunders

Associate Professor in Surgery
Dr. Kevin O. Saunders graduated from Davidson College in 2005 with a bachelor of science in biology. At Davidson College, he trained in the laboratory of Dr. Karen Hales identifying the genetic basis of infertility. Dr. Saunders completed his doctoral research on CD8+ T cell immunity against HIV-1 infection with Dr. Georgia Tomaras at Duke University in 2010. He subsequently trained as a postdoctoral fellow in the laboratories of Drs. Gary Nabel and John Mascola at the National Institutes of
Wiehe

Kevin J Wiehe

Norman L. Letvin Associate Professor in Medicine
Dr. Kevin Wiehe is the associate director of research, director of computational biology and co-director of the Quantitative Research Division at the Duke Human Vaccine Institute (DHVI). He has over 20 years of experience in the field of computational biology and has expertise in computational structural biology, computational genomics, and computational immunology. For the past decade, he has applied his unique background to developing computational approaches for studying the B cell
Williams

Wilton Bryan Williams

Associate Professor in Surgery
Dr. Williams completed a PhD in Biomedical Sciences (Immunology and Microbiology) from the University of Florida and did his postdoctoral work in the laboratory of Dr. Barton Haynes at the Duke Human Vaccine Institute (DHVI). The key goals of HIV vaccine development are to define the host-virus events during natural HIV infection that lead to the induction of broadly neutralizing antibodies, and to recreate those events with a vaccine. As a junior faculty member in the DHVI, Dr. W
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