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    Distinctive variation in the U3R region of the 5' Long Terminal Repeat from diverse HIV-1 strains. 

    Anderson, Lettie; Denny, Thomas; Mbondji-Wonje, Christelle; Dong, Ming; Wang, Xue; Zhao, Jiangqin; Ragupathy, Viswanath; ... (9 authors) (PloS one, 2018-01)
    Functional mapping of the 5'LTR has shown that the U3 and the R regions (U3R) contain a cluster of regulatory elements involved in the control of HIV-1 transcription and expression. As the HIV-1 genome is characterized by ...
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    Development of a contemporary globally diverse HIV viral panel by the EQAPOL program. 

    Brinkley, C; Busch, Michael P; Chen, Y; Demarco, C Todd; Denny, Thomas Norton; Gao, Feng; Hora, Bhavna; ... (13 authors) (J Immunol Methods, 2014-07)
    The significant diversity among HIV-1 variants poses serious challenges for vaccine development and for developing sensitive assays for screening, surveillance, diagnosis, and clinical management. Recognizing a need to develop ...
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    Toward development of a comprehensive external quality assurance program for polyfunctional intracellular cytokine staining assays. 

    Chan, C; Chan, RC-F; Denny, Thomas Norton; Enzor, Jennifer; Gaur, A; Jaimes, M; Rountree, Wes; ... (10 authors) (J Immunol Methods, 2014-07)
    The External Quality Assurance Program Oversight Laboratory (EQAPOL) Flow Cytometry Program assesses the proficiency of NIH/NIAID/DAIDS-supported and potentially other interested research laboratories in performing Intracellular ...
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    Association of HIV-1 Envelope-Specific Breast Milk IgA Responses with Reduced Risk of Postnatal Mother-to-Child Transmission of HIV-1. 

    Brinkley, C; Deal, A; Denny, Thomas Norton; Edwards, RW; Ellington, S; Eudailey, Josh; Ferrari, Guido; ... (25 authors) (J Virol, 2015-10)
    UNLABELLED: Infants born to HIV-1-infected mothers in resource-limited areas where replacement feeding is unsafe and impractical are repeatedly exposed to HIV-1 throughout breastfeeding. Despite this, the majority of infants ...
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    HIV-specific functional antibody responses in breast milk mirror those in plasma and are primarily mediated by IgG antibodies. 

    Center for HIV/AIDS Vaccine Immunology; Denny, Thomas Norton; Ferrari, Guido; Fouda, Genevieve; Hahn, Beatrice H; Haynes, Barton Ford; Kalilani, L; ... (23 authors) (J Virol, 2011-09)
    Despite months of mucosal virus exposure, the majority of breastfed infants born to HIV-infected mothers do not become infected, raising the possibility that immune factors in milk inhibit mucosal transmission of HIV. HIV ...
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    A model for harmonizing flow cytometry in clinical trials. 

    Amos, M; Aranda, R; Banchereau, J; Boshoff, C; Braun, J; Cho, J; Davis, M; ... (42 authors) (Nat Immunol, 2010-11)
    Complexities in sample handling, instrument setup and data analysis are barriers to the effective use of flow cytometry to monitor immunological parameters in clinical trials. The novel use of a central laboratory may help ...
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    Maternal HIV-1 envelope-specific antibody responses and reduced risk of perinatal transmission. 

    Alam, S Munir; Cai, Fangping; Chen, H; Datta, S; Denny, Thomas Norton; Ferrari, Guido; Fong, Y; ... (41 authors) (J Clin Invest, 2015-07-01)
    Despite the wide availability of antiretroviral drugs, more than 250,000 infants are vertically infected with HIV-1 annually, emphasizing the need for additional interventions to eliminate pediatric HIV-1 infections. Here, ...
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    Setting objective thresholds for rare event detection in flow cytometry. 

    Chan, C; Denny, Thomas Norton; Enzor, Jennifer; Frelinger, J; McKinnon, K; Richards, AJ; Staats, Janet; ... (8 authors) (J Immunol Methods, 2014-07)
    The accurate identification of rare antigen-specific cytokine positive cells from peripheral blood mononuclear cells (PBMC) after antigenic stimulation in an intracellular staining (ICS) flow cytometry assay is challenging, ...
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    Leukopak PBMC sample processing for preparing quality control material to support proficiency testing programs. 

    Denny, Thomas Norton; Ferrari, Guido; Garcia, Ambrosia; Keinonen, Sarah; Moody, M Anthony; Sanchez, Ana M (J Immunol Methods, 2014-07)
    External proficiency testing programs designed to evaluate the performance of end-point laboratories involved in vaccine and therapeutic clinical trials form an important part of clinical trial quality assurance. Good clinical ...
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    Comparison of interlaboratory variation in absolute T-cell counts by single-platform and optimized dual-platform methods. 

    Borowski, L; Chow, M; Denny, Thomas Norton; Hultin, LE; Jamieson, BD; Margolick, JB; Menendez, FA; ... (8 authors) (Cytometry B Clin Cytom, 2010-05)
    BACKGROUND: Previous studies have reported that the adoption of a single-platform flow cytometry cell counting method resulted in lower interlaboratory variation in absolute T cell counts as compared to predicate dual-platform ...
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    Denny, Thomas Norton (41)
    Haynes, Barton Ford (12)Ferrari, Guido (11)Tomaras, Georgia Doris (11)Montefiori, David Charles (10)Rountree, Wes (9)Sanchez, Ana M (9)Moody, M Anthony (7)Permar, Sallie R (7)Hahn, Beatrice H (6)... View MoreDate Issued2014 (18)2011 (6)2015 (5)2013 (4)2010 (3)2012 (3)2008 (1)2009 (1)2018 (1)TypeJournal article (42)Subject
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    HIV Infections (25)HIV-1 (22)Reproducibility of Results (17)Female (15)Practice Guidelines as Topic (14)Guideline Adherence (13)Observer Variation (13)Predictive Value of Tests (13)Quality Control (13)... View MoreAffiliation of Duke Author(s)
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