Robust deep learning classification of adamantinomatous craniopharyngioma from limited preoperative radiographic images.

dc.contributor.author

Prince, Eric W

dc.contributor.author

Whelan, Ros

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Mirsky, David M

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Stence, Nicholas

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Staulcup, Susan

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Klimo, Paul

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Anderson, Richard CE

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Niazi, Toba N

dc.contributor.author

Grant, Gerald

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Souweidane, Mark

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Johnston, James M

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Jackson, Eric M

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Limbrick, David D

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Smith, Amy

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Drapeau, Annie

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Chern, Joshua J

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Kilburn, Lindsay

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Ginn, Kevin

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Naftel, Robert

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Dudley, Roy

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Tyler-Kabara, Elizabeth

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Jallo, George

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Handler, Michael H

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Jones, Kenneth

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Donson, Andrew M

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Foreman, Nicholas K

dc.contributor.author

Hankinson, Todd C

dc.date.accessioned

2022-09-30T17:49:34Z

dc.date.available

2022-09-30T17:49:34Z

dc.date.issued

2020-10

dc.date.updated

2022-09-30T17:49:32Z

dc.description.abstract

Deep learning (DL) is a widely applied mathematical modeling technique. Classically, DL models utilize large volumes of training data, which are not available in many healthcare contexts. For patients with brain tumors, non-invasive diagnosis would represent a substantial clinical advance, potentially sparing patients from the risks associated with surgical intervention on the brain. Such an approach will depend upon highly accurate models built using the limited datasets that are available. Herein, we present a novel genetic algorithm (GA) that identifies optimal architecture parameters using feature embeddings from state-of-the-art image classification networks to identify the pediatric brain tumor, adamantinomatous craniopharyngioma (ACP). We optimized classification models for preoperative Computed Tomography (CT), Magnetic Resonance Imaging (MRI), and combined CT and MRI datasets with demonstrated test accuracies of 85.3%, 83.3%, and 87.8%, respectively. Notably, our GA improved baseline model performance by up to 38%. This work advances DL and its applications within healthcare by identifying optimized networks in small-scale data contexts. The proposed system is easily implementable and scalable for non-invasive computer-aided diagnosis, even for uncommon diseases.

dc.identifier

10.1038/s41598-020-73278-8

dc.identifier.issn

2045-2322

dc.identifier.issn

2045-2322

dc.identifier.uri

https://hdl.handle.net/10161/25888

dc.language

eng

dc.publisher

Springer Science and Business Media LLC

dc.relation.ispartof

Scientific reports

dc.relation.isversionof

10.1038/s41598-020-73278-8

dc.subject

Humans

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Craniopharyngioma

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Brain Neoplasms

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Diagnosis, Computer-Assisted

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Tomography, X-Ray Computed

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Magnetic Resonance Imaging

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Algorithms

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Models, Theoretical

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Image Processing, Computer-Assisted

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Preoperative Period

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Deep Learning

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Neural Networks, Computer

dc.title

Robust deep learning classification of adamantinomatous craniopharyngioma from limited preoperative radiographic images.

dc.type

Journal article

duke.contributor.orcid

Grant, Gerald|0000-0002-2651-4603

pubs.begin-page

16885

pubs.issue

1

pubs.organisational-group

Duke

pubs.organisational-group

School of Medicine

pubs.organisational-group

Clinical Science Departments

pubs.organisational-group

Institutes and Centers

pubs.organisational-group

Duke Cancer Institute

pubs.organisational-group

Neurosurgery

pubs.publication-status

Published

pubs.volume

10

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