Partition functions from rao-blackwellized tempered sampling

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2016-01-01

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© 2016 by the author(s). Partition functions of probability distributions are important quantities for model evaluation and comparisons. We present a new method to compute partition functions of complex and multi-modal distributions. Such distributions are often sampled using simulated tempering, which augments the target space with an auxiliary inverse temperature variable. Our method exploits the multinomial probability law of the inverse temperatures, and provides estimates of the partition function in terms of a simple quotient of Rao-Blackwellized marginal inverse temperature probability estimates, which are updated while sampling. We show that the method has interesting connections with several alternative popular methods, and offers some significant advantages. In particular, we empirically find that the new method provides more accurate estimates than Annealed Importance Sampling when calculating partition functions of large Restricted Boltz-mann Machines (RBM); moreover, the method is sufficiently accurate to track training and validation log-likelihoods during learning of RBMs, at minimal computational cost.

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Scholars@Duke

Carlson

David Carlson

Associate Professor of Civil and Environmental Engineering

My general research focus is on developing novel machine learning and artificial intelligence techniques that can be used to accelerate scientific discovery.  I work extensively both on the fundamental theory and algorithms as well as translating them into scientific applications.  I have extensive partnerships deploying machine learning techniques in environmental health, mental health, and neuroscience.  


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