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Item Open Access 3Rs for innovating novel antibiotics: sharing resources, risks, and rewards.(BMJ, 2012-04-03) So, Anthony D; Ruiz-Esparza, Quentin; Gupta, Neha; Cars, OttoItem Open Access A brief history of research synthesis.(Eval Health Prof, 2002-03) Chalmers, Iain; Hedges, Larry V; Cooper, HarrisScience is supposed to be cumulative, but scientists only rarely cumulate evidence scientifically. This means that users of research evidence have to cope with a plethora of reports of individual studies with no systematic attempt made to present new results in the context of similar studies. Although the need to synthesize research evidence has been recognized for well over two centuries, explicit methods for this form of research were not developed until the 20th century. The development of methods to reduce statistical imprecision using quantitative synthesis (meta-analysis) preceded the development of methods to reduce biases, the latter only beginning to receive proper attention during the last quarter of the 20th century. In this article, the authors identify some of the trends and highlights in this history, to which researchers in the physical, natural, and social sciences have all contributed, and speculate briefly about the "future history" of research synthesis.Item Restricted A census of marine biodiversity knowledge, resources, and future challenges.(PLoS One, 2010-08-02) Costello, Mark John; Coll, Marta; Danovaro, Roberto; Halpin, Pat; Ojaveer, Henn; Miloslavich, PatriciaItem Open Access An ecological perspective on nanomaterial impacts in the environment.(J Environ Qual, 2010-11) Bernhardt, Emily S; Colman, Benjamin P; Hochella, Michael F; Cardinale, Bradley J; Nisbet, Roger M; Richardson, Curtis J; Yin, LiyanGrowing concerns over the potential for unintended, adverse consequences of engineered nanoparticles (ENPs) in the environment have generated new research initiatives focused on understanding the ecological effects of ENPs. Almost nothing is currently known about the fate and transport of ENPs in environmental waters, soils, and sediments or about the biological impacts of ENPs in natural environments, and the bulk of modern nanotoxicogical research is focused on highly controlled laboratory studies with single species in simple media. In this paper, we provide an ecological perspective on the current state of knowledge regarding the likely environmental impacts of nanomaterials and propose a strategy for making rapid progress in new research in ecological nanoscience.Item Open Access An interview with Professor Robert J. Lefkowitz, M.D. Interview by Vicki Glaser.(Assay Drug Dev Technol, 2003-04) Lefkowitz, Robert JRobert J. Lefkowitz, M.D., is James B. Duke Professor of Medicine and Professor of Biochemistry at the Duke University Medical Center. He has been an Investigator of the Howard Hughes Medical Institute since 1976. Dr. Lefkowitz received a Bachelor's degree from Columbia College and an M.D. degree from Columbia University College of Physicians and Surgeons. After serving an internship and one year of general medical residency at the College of Physicians and Surgeons, he served as a Clinical and Research Associate with Drs. Jesse Roth and Ira Pastan at the National Institutes of Health. He then completed his medical residency and research and clinical training in cardiovascular disease at the Massachusetts General Hospital, Boston. During this time, he continued his research in the laboratories of Dr. Edgar Haber and was a teaching fellow at Harvard Medical School. On completing his training, he was appointed Associate Professor of Medicine and Assistant Professor of Biochemistry at the Duke University Medical Center.Item Open Access Analysis of educational materials and destruction/opt-out initiatives for storage and use of residual newborn screening samples.(Genet Test Mol Biomarkers, 2010-10) Haga, Susanne BIn recent years, the storage and use of residual newborn screening (NBS) samples has gained attention. To inform ongoing policy discussions, this article provides an update of previous work on new policies, educational materials, and parental options regarding the storage and use of residual NBS samples. A review of state NBS Web sites was conducted for information related to the storage and use of residual NBS samples in January 2010. In addition, a review of current statutes and bills introduced between 2005 and 2009 regarding storage and/or use of residual NBS samples was conducted. Fourteen states currently provide information about the storage and/or use of residual NBS samples. Nine states provide parents the option to request destruction of the residual NBS sample after the required storage period or the option to exclude the sample for research uses. In the coming years, it is anticipated that more states will consider policies to address parental concerns about the storage and use of residual NBS samples. Development of new policies regarding storage and use of residual NBS samples will require careful consideration of impact on NBS programs, parent and provider educational materials, and respect for parents among other issues.Item Open Access Data archiving.(Am Nat, 2010-02) Whitlock, Michael C; McPeek, Mark A; Rausher, Mark D; Rieseberg, Loren; Moore, Allen JItem Open Access Designing and Implementing a Community-Engaged Research e-Library: A Case Study for Adapting Academic Library Information Infrastructure to Respond to Stakeholder Needs(College and Research Libraries, 2025-01-01) Efird-Green, Lea; Marion, Eve; Gierisch, Jennifer; Willis, Diane; Corsino, LeonorItem Open Access Developing a Language for Applied Causal Analysis: The Assessment of Causal Networks in Interdisciplinary Research(2018) Turpin, Kyle JosephIntegration of disparate research fields has become a major concern in recent years due to the increasing complexity of the issues that face policy makers and researchers. Concerted efforts have therefore been initiated to remove the traditional barriers between research fields to allow for greater cooperation between policy makers and researchers, particularly in the fields of health, the environment, and development. The Bridge Collaborative is one such organization dedicated to facilitating this process through the use of results chains. However, because of a lack of experimental data or observational datasets traditionally endemic to interdisciplinary policy research, they lack an effective mechanism for analyzing causal dependence among network variables. The purpose of this thesis is therefore to create a method of analyzing causal relationships using expert knowledge that can still pass the rigorous tests necessary to assert causality in the traditional experimental and observational data approaches. Building upon previous work of statisticians, philosophers, and computer scientists, I create a question template that will allow a researcher to easily check and refine a causal network and explore alternatives to that network based on experience and elicited expert judgement alone. I then perform a case study using this template based on the work of the Food-Energy-Water (FEW) Catalyst project, a group initiative within the Bridge Collaborative, to review a causal network based on a systematic literature search. I conclude that a causal network can indeed be constructed, explored, and adjusted using logical reasoning and expert judgement—a finding that has implications for researchers seeking to create reliable models using causal networks as their base.
Item Open Access Early Effects of COVID-19 Pandemic on Neurosurgical Training in the United States: A Case Volume Analysis of 8 Programs.(World neurosurgery, 2021-01) Aljuboori, Zaid S; Young, Christopher C; Srinivasan, Visish M; Kellogg, Ryan T; Quon, Jennifer L; Alshareef, Mohammed A; Chen, Stephanie H; Ivan, Michael; Grant, Gerald A; McEvoy, Sean D; Davanzo, Justin R; Majid, Sonia; Durfy, Sharon; Levitt, Michael R; Sieg, Emily P; Ellenbogen, Richard G; Nauta, Haring JObjective
To determine the impact of the 2019 novel coronavirus disease (COVID-19) pandemic on operative case volume in 8 U.S. neurosurgical residency training programs in early 2020 and to survey these programs regarding training activities during this period.Methods
A retrospective review was conducted of monthly operative case volumes and types for 8 residency programs for 2019 and January through April 2020. Cases were grouped as elective cranial, elective spine, and nonelective emergent cases. Programs were surveyed regarding residents' perceptions of the impact of COVID-19 on surgical training, didactics, and research participation. Data were analyzed for individual programs and pooled across programs.Results
Across programs, the 2019 monthly mean ± SD case volume was 211 ± 82; 2020 mean ± SD case volumes for January, February, March, and April were 228 ± 93, 214 ± 84, 180 ± 73, and 107 ± 45. Compared with 2019, March and April 2020 mean cases declined 15% (P = 0.003) and 49% (P = 0.002), respectively. COVID-19 affected surgical case volume for all programs; 75% reported didactics negatively affected, and 90% reported COVID-19 resulted in increased research time. Several neurosurgery residents required COVID-19 testing; however, to our knowledge, only 1 resident from the participating programs tested positive.Conclusions
This study documents a significant reduction in operative volume in 8 neurosurgery residency training programs in early 2020. During this time, neurosurgery residents engaged in online didactics and research-related activities, reporting increased research productivity. Residency programs should collect data to determine the educational impact of the COVID-19 pandemic on residents' operative case volumes, identify deficiencies, and develop plans to mitigate any effects.Item Embargo Health System Capacity for Epilepsy Care in Uganda: A Survey of Health Facilities In Western Uganda(2023) Njeru, Paula NjokiBackground
Epilepsy is a chronic neurological disorder characterized by recurrent seizure activity caused by abnormal electrical activity in the brain. Over 80% of all cases globally occur in Low- and Middle-Income countries. A high treatment gap exists in LMICs, including Uganda, with 80% of people with epilepsy never receiving treatment. Studies have shown that even with existing medical services, a lack of skilled workforce, medication stock-outs, and long distances to health facilities contribute to the high treatment gap. This study describes the capacity, distribution of health facilities, and referral patterns between facilities that care for epilepsy patients in Uganda.
Methods
We conducted a cross-sectional survey adapted from the WHO Tool for Situational Analysis to Assess Emergency and Essential Surgical Care. It was modified to include WHO Mental Health Gap Action Program (mhGAP) resources for epilepsy and the Tool for Situational Analysis to Assess Epilepsy Care. Data collection occurred between July and August 2022. Our sample included all regional and general hospitals and a sample of randomly selected Health Centers in Southwestern Uganda. We used probability proportional to size sampling to determine which Health Centers to include in our sample. We had only public health facilities in our sample. Data were collected through in-person interviews conducted by trained research assistants. A three-tiered categorical score (full, intermediate, and low capacity) was used to describe epilepsy capacity. For scoring, hospitals were stratified into three groups/facility levels: tertiary care (regional referral hospitals), secondary care (district hospitals/health center IVs), and primary care (health center IIIs), as we hypothesized that available resources would differ between the groups. We did geospatial mapping to show the distribution of facilities.
Ethical approval was obtained from the Makerere School of Public Health Research Ethics Committee (Protocol 1104), the Uganda National Council of Science and Technology (Protocol HS2344ES), and Duke University’s Institutional Review Board (Protocol 00110747).
Results63 facilities were surveyed, with 100% completion in all facilities. 63 (100%) facilities provide care for epilepsy patients. None of the facilities surveyed had full capacity to treat epilepsy patients. Most of our sampled facilities had a low capacity to treat epilepsy: 100% of tertiary care facilities, 77.3% of secondary care facilities, and 83.8% of primary care facilities. Overall capacity was weakest in medication, equipment, and human resources and highest in infrastructure and guidelines. Conclusion While epilepsy services are present in Uganda’s southwestern region, a lack of vital medicines, staff shortages, and technology can limit service delivery. Task shifting and sharing have been widely implemented to address workforce shortages. The findings of this study can help inform policy to improve service delivery for epilepsy patients.
Item Open Access I Knew Home When I Saw it: Mapping RaMell Ross’s Hale County This Morning, This Evening(2022-05-06) Reeves, DavidThis project consists of two parts: 1) an initial, written analysis of Hale County This Morning, This Evening, a 2018 documentary of my home county (Hale County, Alabama) by filmmaker (and former public school coach) RaMell Ross, exploring details of the film through RaMell Ross’s own words, in interviews, about his style, through my personal experiences of the area through research of historical context, and close readings of particular scenes in the film. And 2) an interactive map that offers a deeper understanding of the area, the people, and important places Ross features in the film, drawing on all of the work for part 1 and on an interview between the author and the documentary filmmaker himself. The audio of this interview is included in a separate file. This second part, the story map with visuals and audio, is my most important contribution, the first being detailed research towards, and also an introduction to, the interactive map. Part 2: https://storymaps.arcgis.com/stories/68685e18031d4ac9a137cc68e22da6f7Item Open Access Identifying Barriers and Practical Solutions to Conducting Site-Based Research in North America: Exploring Acute Heart Failure Trials As a Case Study.(Heart Fail Clin, 2015-10) Ambrosy, Andrew P; Mentz, Robert J; Krishnamoorthy, Arun; Greene, Stephen J; Severance, Harry WAlthough the prognosis of ambulatory heart failure (HF) has improved dramatically there have been few advances in the management of acute HF (AHF). Despite regional differences in patient characteristics, background therapy, and event rates, AHF clinical trial enrollment has transitioned from North America and Western Europe to Eastern Europe, South America, and Asia-Pacific where regulatory burden and cost of conducting research may be less prohibitive. It is unclear if the results of clinical trials conducted outside of North America are generalizable to US patient populations. This article uses AHF as a paradigm and identifies barriers and practical solutions to successfully conducting site-based research in North America.Item Open Access Institutional review boards' use and understanding of certificates of confidentiality.(PloS one, 2012-01) Beskow, Laura M; Check, Devon K; Namey, Emily E; Dame, Lauren A; Lin, Li; Cooper, Alexandra; Weinfurt, Kevin P; Wolf, Leslie ECertificates of Confidentiality, issued by agencies of the U.S. government, are regarded as an important tool for meeting ethical and legal obligations to safeguard research participants' privacy and confidentiality. By shielding against forced disclosure of identifying data, Certificates are intended to facilitate research on sensitive topics critical to the public's health. Although Certificates are potentially applicable to an extensive array of research, their full legal effect is unclear, and little is known about stakeholders' views of the protections they provide. To begin addressing this challenge, we conducted a national survey of institutional review board (IRB) chairs, followed by telephone interviews with selected chairs, to learn more about their familiarity with and opinions about Certificates; their institutions' use of Certificates; policies and practices concerning when Certificates are required or recommended; and the role Certificates play in assessments of research risk. Overall, our results suggest uncertainty about Certificates among IRB chairs. On most objective knowledge questions, most respondents chose the incorrect answer or 'unsure'. Among chairs who reported more familiarity with Certificates, composite opinion scores calculated based on five survey questions were evenly distributed among positive, neutral/middle, and negative views. Further, respondents expressed a variety of ideas about the appropriate use of Certificates, what they are intended to protect, and their effect on research risk. Nevertheless, chairs who participated in our study commonly viewed Certificates as a potentially valuable tool, frequently describing them as an 'extra layer' of protection. These findings lead to several practical observations concerning the need for more stakeholder education about Certificates, consideration of Certificates for a broader range of studies, the importance of remaining vigilant and using all tools available to protect participants' confidentiality, and the need for further empirical investigation of Certificates' effect on researchers and research participants.Item Open Access Not published, not indexed: issues in generating and finding hospice and palliative care literature.(J Palliat Med, 2010-06) Tieman, Jennifer J; Abernethy, Amy; Currow, David CINTRODUCTION: Accessing new knowledge as the evidence base for hospice and palliative care grows has specific challenges for the discipline. This study aimed to describe conversion rates of palliative and hospice care conference abstracts to journal articles and to highlight that some palliative care literature may not be retrievable because it is not indexed on bibliographic databases. METHODS: Substudy A tracked the journal publication of conference abstracts selected for inclusion in a gray literature database on www.caresearch.com.au . Abstracts were included in the gray literature database following handsearching of proceedings of over 100 Australian conferences likely to have some hospice or palliative care content that were held between 1980 and 1999. Substudy B looked at indexing from first publication until 2001 of three international hospice and palliative care journals in four widely available bibliographic databases through systematic tracing of all original papers in the journals. RESULTS: Substudy A showed that for the 1338 abstracts identified only 15.9% were published (compared to an average in health of 45%). Published abstracts were found in 78 different journals. Multiauthor abstracts and oral presentations had higher rates of conversion. Substudy B demonstrated lag time between first publication and bibliographic indexing. Even after listing, idiosyncratic noninclusions were identified. DISCUSSION: There are limitations to retrieval of all possible literature through electronic searching of bibliographic databases. Encouraging publication in indexed journals of studies presented at conferences, promoting selection of palliative care journals for database indexing, and searching more than one bibliographic database will improve the accessibility of existing and new knowledge in hospice and palliative care.Item Open Access Partnership Conference(Annals of Global Health, 2017-10-27) Bartlett, JA; Cao, S; Mmbaga, B; Qian, X; Merson, M; Kramer, R© 2017 Icahn School of Medicine at Mount Sinai. Background: The Duke Global Health Institute (DGHI) was founded in 2006 with a goal to foster interdisciplinary global health education and research across Duke University and Duke Medical Center. Critical to achieving this goal is the need to develop and sustain strong international partnerships. Objective: To host a conference with multiple international partners and strengthen existing relationships. Methods: After a deliberate year-long planning process, DGHI convened a Partnership Conference with its international partners on the Duke University campus in conjunction with its 10th Anniversary Celebration. The Partnership Conference sought to promote an exchange of novel ideas in support of global health education and research, explore new collaborations in South-South relationships, and identify and facilitate pursuit of new educational and research opportunities. Findings: A total of 25 partners from 10 countries and 46 DGHI faculty members participated in the 3-day event in October 2016. Activities included workshops on preselected research topics, educational symposia on novel teaching methods and harnessing technological advances, introduction of the Health Humanities Laboratory to prepare students and trainees for fieldwork, and discussions of research infrastructure and training needs. Surveys from visiting partners revealed a high degree of satisfaction. Proposed action items include methods to realize improved communications, enhancement of mutual education opportunities, support and mentoring to build local research capacity, and more exchange of faculty and students between partnering institutions. Conclusions: With careful planning from all parties, a multilateral partnership conference including both university and medical center faculty can be a productive forum for exchange on global health education and research. Sustaining such partnerships is vital to the success of global health scholarship.Item Open Access Patient-based outcome assessment instruments in acupuncture research.(J Altern Complement Med, 2010-01) Khorsan, Raheleh; York, Alexandra; Coulter, Ian D; Wurzman, Rachel; Walter, Joan AG; Coeytaux, Remy RBACKGROUND: Outcome assessment can support the therapeutic process by providing a way to track symptoms and functionality over time, providing insights to clinicians and patients, as well as offering a common language to discuss patient behavior/functioning. OBJECTIVES: In this article, we examine the patient-based outcome assessment (PBOA) instruments that have been used to determine outcomes in acupuncture clinical research and highlight measures that are feasible, practical, economical, reliable, valid, and responsive to clinical change. The aims of this review were to assess and identify the commonly available PBOA measures, describe a framework for identifying appropriate sets of measures, and address the challenges associated with these measures and acupuncture. Instruments were evaluated in terms of feasibility, practicality, economy, reliability, validity, and responsiveness to clinical change. METHODS: This study was a systematic review. A total of 582 abstracts were reviewed using PubMed (from inception through April 2009). RESULTS: A total of 582 citations were identified. After screening of title/abstract, 212 articles were excluded. From the remaining 370 citations, 258 manuscripts identified explicit PBOA; 112 abstracts did not include any PBOA. The five most common PBOA instruments identified were the Visual Analog Scale, Symptom Diary, Numerical Pain Rating Scales, SF-36, and depression scales such as the Beck Depression Inventory. CONCLUSIONS: The way a questionnaire or scale is administered can have an effect on the outcome. Also, developing and validating outcome measures can be costly and difficult. Therefore, reviewing the literature on existing measures before creating or modifying PBOA instruments can significantly reduce the burden of developing a new measure.Item Open Access Patient-centered priorities for improving medication management and adherence.(Patient education and counseling, 2015-01) McMullen, Carmit K; Safford, Monika M; Bosworth, Hayden B; Phansalkar, Shobha; Leong, Amye; Fagan, Maureen B; Trontell, Anne; Rumptz, Maureen; Vandermeer, Meredith L; Centers for Education and Research on Therapeutics Patient-Centered Medication Management Workshop Working Group; Brinkman, William B; Burkholder, Rebecca; Frank, Lori; Hommel, Kevin; Mathews, Robin; Hornbrook, Mark C; Seid, Michael; Fordis, Michael; Lambert, Bruce; McElwee, Newell; Singh, Jasvinder AObjective
The Centers for Education and Research on Therapeutics convened a workshop to examine the scientific evidence on medication adherence interventions from the patient-centered perspective and to explore the potential of patient-centered medication management to improve chronic disease treatment.Methods
Patients, providers, researchers, and other stakeholders (N = 28) identified and prioritized ideas for future research and practice. We analyzed stakeholder voting on priorities and reviewed themes in workshop discussions.Results
Ten priority areas emerged. Three areas were highly rated by all stakeholder groups: creating tools and systems to facilitate and evaluate patient-centered medication management plans; developing training on patient-centered prescribing for providers; and increasing patients' knowledge about medication management. However, priorities differed across stakeholder groups. Notably, patients prioritized using peer support to improve medication management while researchers did not.Conclusion
Engaging multiple stakeholders in setting a patient-centered research agenda and broadening the scope of adherence interventions to include other aspects of medication management resulted in priorities outside the traditional scope of adherence research.Practice implications
Workshop participants recognized the potential benefits of patient-centered medication management but also identified many challenges to implementation that require additional research and innovation.Item Open Access Priorities to Overcome Barriers Impacting Data Science Application in Emergency Care Research.(Academic emergency medicine : official journal of the Society for Academic Emergency Medicine, 2019-01) Puskarich, Michael A; Callaway, Clif; Silbergleit, Robert; Pines, Jesse M; Obermeyer, Ziad; Wright, David W; Hsia, Renee Y; Shah, Manish N; Monte, Andrew A; Limkakeng, Alexander T; Meisel, Zachary F; Levy, Phillip DFor a variety of reasons including cheap computing, widespread adoption of electronic medical records, digitalization of imaging and biosignals, and rapid development of novel technologies, the amount of health care data being collected, recorded, and stored is increasing at an exponential rate. Yet despite these advances, methods for the valid, efficient, and ethical utilization of these data remain underdeveloped. Emergency care research, in particular, poses several unique challenges in this rapidly evolving field. A group of content experts was recently convened to identify research priorities related to barriers to the application of data science to emergency care research. These recommendations included: 1) developing methods for cross-platform identification and linkage of patients; 2) creating central, deidentified, open-access databases; 3) improving methodologies for visualization and analysis of intensively sampled data; 4) developing methods to identify and standardize electronic medical record data quality; 5) improving and utilizing natural language processing; 6) developing and utilizing syndrome or complaint-based based taxonomies of disease; 7) developing practical and ethical framework to leverage electronic systems for controlled trials; 8) exploring technologies to help enable clinical trials in the emergency setting; and 9) training emergency care clinicians in data science and data scientists in emergency care medicine. The background, rationale, and conclusions of these recommendations are included in the present article.Item Open Access Remotely Sensed Data Informs Red List Evaluations and Conservation Priorities in Southeast Asia.(PloS one, 2016-01) Li, Binbin V; Hughes, Alice C; Jenkins, Clinton N; Ocampo-Peñuela, Natalia; Pimm, Stuart LThe IUCN Red List has assessed the global distributions of the majority of the world's amphibians, birds and mammals. Yet these assessments lack explicit reference to widely available, remotely-sensed data that can sensibly inform a species' risk of extinction. Our first goal is to add additional quantitative data to the existing standardised process that IUCN employs. Secondly, we ask: do our results suggest species of concern-those at considerably greater risk than hitherto appreciated? Thirdly, these assessments are not only important on a species-by-species basis. By combining distributions of species of concern, we map conservation priorities. We ask to what degree these areas are currently protected and how might knowledge from remote sensing modify the priorities? Finally, we develop a quick and simple method to identify and modify the priority setting in a landscape where natural habitats are disappearing rapidly and so where conventional species' assessments might be too slow to respond. Tropical, mainland Southeast Asia is under exceptional threat, yet relatively poorly known. Here, additional quantitative measures may be particularly helpful. This region contains over 122, 183, and 214 endemic mammals, birds, and amphibians, respectively, of which the IUCN considers 37, 21, and 37 threatened. When corrected for the amount of remaining natural habitats within the known elevation preferences of species, the average sizes of species ranges shrink to <40% of their published ranges. Some 79 mammal, 49 bird, and 184 amphibian ranges are <20,000km2-an area at which IUCN considers most other species to be threatened. Moreover, these species are not better protected by the existing network of protected areas than are species that IUCN accepts as threatened. Simply, there appear to be considerably more species at risk than hitherto appreciated. Furthermore, incorporating remote sensing data showing where habitat loss is prevalent changes the locations of conservation priorities.