Evaluation of tumor microenvironment and biomarkers of immune checkpoint inhibitor response in metastatic renal cell carcinoma.

dc.contributor.author

Brown, Landon C

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Zhu, Jason

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Desai, Kunal

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Kinsey, Emily

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Kao, Chester

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Lee, Yong Hee

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Pabla, Sarabjot

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Labriola, Matthew K

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Tran, Jennifer

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Dragnev, Konstantin H

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Tafe, Laura J

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Dayyani, Farshid

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Gupta, Rajan T

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McCall, Shannon

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George, Daniel J

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Glenn, Sean T

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Nesline, Mary K

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George, Saby

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Zibelman, Matthew

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Morrison, Carl

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Ornstein, Moshe C

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Zhang, Tian

dc.date.accessioned

2022-11-01T15:25:30Z

dc.date.available

2022-11-01T15:25:30Z

dc.date.issued

2022-10

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2022-11-01T15:25:28Z

dc.description.abstract

Background

Immunotherapy combinations including ipilimumab and nivolumab are now the standard of care for untreated metastatic renal cell carcinoma (mRCC). Biomarkers of response are lacking to predict patients who will have a favorable or unfavorable response to immunotherapy. This study aimed to use the OmniSeq transcriptome-based platform to develop biomarkers of response to immunotherapy.

Methods

Two cohorts of patients were retrospectively collected. These included an investigational cohort of patients with mRCC treated with immune checkpoint inhibitor therapy from five institutions, and a subsequent validation cohort of patients with mRCC treated with combination ipilimumab and nivolumab from two institutions (Duke Cancer Institute and Cleveland Clinic Taussig Cancer Center). Tissue-based RNA sequencing was performed using the OmniSeq Immune Report Card on banked specimens to identify gene signatures and immune checkpoints associated with differential clinical outcomes. A 5-gene expression panel was developed based on the investigational cohort and was subsequently evaluated in the validation cohort. Clinical outcomes including progression-free survival (PFS) and overall survival (OS) were extracted by retrospective chart review. Objective response rate (ORR) was assessed by Response Evaluation Criteria in Solid Tumors (RECIST) V.1.1.

Results

The initial investigation cohort identified 86 patients with mRCC who received nivolumab (80%, 69/86), ipilimumab/nivolumab (14%, 12/86), or pembrolizumab (6%, 5/86). A gene expression score was created using the top five genes found in responders versus non-responders (FOXP3, CCR4, KLRK1, ITK, TIGIT). The ORR in patients with high gene expression (GEhigh) on the 5-gene panel was 29% (14/48), compared with low gene expression (GElow) 3% (1/38, χ2 p=0.001). The validation cohort was comprised of 62 patients who received ipilimumab/nivolumab. There was no difference between GEhigh and GElow in terms of ORR (44% vs 38.5%), PFS (HR 1.5, 95% CI 0.58 to 3.89), or OS (HR 0.96, 95% CI 0.51 to 1.83). Similarly, no differences in ORR, PFS or OS were observed when patients were stratified by tumor mutational burden (high=top 20%), PD-L1 (programmed death-ligand 1) expression by immunohistochemistry or RNA expression, or CTLA-4 (cytotoxic T-lymphocytes-associated protein 4) RNA expression. The International Metastatic RCC Database Consortium (IMDC) risk score was prognostic for OS but not PFS.

Conclusion

A 5-gene panel that was associated with improved ORR in a predominantly nivolumab monotherapy population of patients with mRCC was not predictive for radiographic response, PFS, or OS among patients with mRCC treated with ipilimumab and nivolumab.
dc.identifier

jitc-2022-005249

dc.identifier.issn

2051-1426

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2051-1426

dc.identifier.uri

https://hdl.handle.net/10161/26154

dc.language

eng

dc.publisher

BMJ

dc.relation.ispartof

Journal for immunotherapy of cancer

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10.1136/jitc-2022-005249

dc.subject

Humans

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Carcinoma, Renal Cell

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Kidney Neoplasms

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Retrospective Studies

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Forkhead Transcription Factors

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Tumor Microenvironment

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CTLA-4 Antigen

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Ipilimumab

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B7-H1 Antigen

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Nivolumab

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Immune Checkpoint Inhibitors

dc.title

Evaluation of tumor microenvironment and biomarkers of immune checkpoint inhibitor response in metastatic renal cell carcinoma.

dc.type

Journal article

duke.contributor.orcid

Labriola, Matthew K|0000-0003-0919-9864

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Gupta, Rajan T|0000-0002-2984-5010

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McCall, Shannon|0000-0003-3957-061X

duke.contributor.orcid

Zhang, Tian|0000-0001-8914-3531

pubs.begin-page

e005249

pubs.issue

10

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Duke

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School of Medicine

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Clinical Science Departments

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Institutes and Centers

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Medicine

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Surgery

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Medicine, Medical Oncology

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Duke Cancer Institute

pubs.publication-status

Published

pubs.volume

10

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